BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D01SP1|AL429376
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1779 1745 0.0
>3x_Contig1779
Length = 24855
Score = 1745 bits (869), Expect = 0.0
Identities = 935/966 (96%), Gaps = 3/966 (0%)
Strand = Plus / Minus
Query: 1 gatcttctctacagtagcagaagaatccgcttcgctctgcaatgaaaacyctttcaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 22523 gatcttctctacagtagcagaagaatccgcttcgctctgcaatgaaaaccctttcaaaag 22464
Query: 61 cttaattaatcccataayttcytagtyttagaagagcggggcaactgaacaatgggcacc 120
||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 22463 cttaattaatcccataacttcctagtcttagaagagcggggcaactgaacaatgggcacc 22404
Query: 121 gaagctctttaccagctgataatytgggccacaaaggtgcacaaatacagtttctattca 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 22403 gaagctctttaccagctgataatctgggccacaaaggtgcacaaatacagtttctattca 22344
Query: 181 cctttacgttattatagayaaaagttatyatgtytataaaatyagttcacaaaccaatga 240
|||||||||||||||||| ||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 22343 cctttacgttattatagacaaaagttatcatgtctataaaatcagttcacaaaccaatga 22284
Query: 241 tcgttatataatatatatwtttwtatatttaatataccaaattaaacccgctgctggcag 300
||||||||||||| |||| ||| ||||| ||||||||||||| |||||||||||||||||
Sbjct: 22283 tcgttatataatacatatatttatatatctaatataccaaatcaaacccgctgctggcag 22224
Query: 301 tatattttayacattaaagatgttttttattttaytgcaacaatagtgacccagatttgg 360
||||||||| ||||||||||||| ||| |||||| |||||||||||||||||||||||||
Sbjct: 22223 tatattttacacattaaagatgtctttcattttactgcaacaatagtgacccagatttgg 22164
Query: 361 taatgtgagagaagataaaattgggatyaaagacagagagaaacgttgcacagaacctca 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 22163 taatgtgagagaagataaaattgggatcaaagacagagagaaacgttgcacagaacctca 22104
Query: 421 tgatgtcgagactctggtttgttgcttattytttyatcagcggttctatgagttagccaa 480
|||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||
Sbjct: 22103 tgatgtcgagactctggtttgtcgcttatcctttcatcagcggttctatgagttagccaa 22044
Query: 481 gtatttttycactagtaatttcttacccggaagaagtgttggataccaccggccgagtta 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22043 gtatttttccactagtaatttcttacccggaagaagtgttggataccaccggccgagtta 21984
Query: 541 tatccgctagtggaacaacctgaaccccgtgtccatattctaaacgcggataaacagaaa 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21983 tatccgctagcggaacaacctgaaccccgtgtccatattctaaacgcggataaacagaaa 21924
Query: 601 aaccgataaagcagcaacaagacgttaccgtacgttaggagcggactaagctgggaggaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21923 aaccgataaagcagcaacaagacgttaccgtacgttaggagcggactaagctgggaggaa 21864
Query: 661 atgcgacgacttctttctacaaaagttatttgcacttaagaagcatttgacctatttgag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21863 atgcgacgacttctttctacaaaagttatttgcacttaagaagcatttgacctatttgag 21804
Query: 721 agatctgcatcggaataagacggtgagattgcaatagtgtccacgggacttctattttta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21803 agatctgcatcggaataagacggtgagattgcaatagtgtccacgggacttctattttta 21744
Query: 781 cccganaacattgatggctccatcctcatggcccaagtcaactgagawaaaattgctcag 840
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 21743 cccgaaaacattgatggctccatcctcatggcccaagtcaactgagataaaattgctcag 21684
Query: 841 tgcatctatatatcgcttggattt-cccaccgaatatctacttggtcacgtgacttgttt 899
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 21683 tgcatctatatatcgcttggatttccccaccgaatatctacttggtcacgtgacttgttt 21624
Query: 900 ctacatatttcgttctcttcacgcggtac-ggcggggaaactgggaaaggattg-amcat 957
||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||
Sbjct: 21623 ctacatatttcgttctcttcacgcggtactggcggggaaactgggaaaggattgaaccat 21564
Query: 958 tgtttt 963
||||||
Sbjct: 21563 tgtttt 21558
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5425
Number of Sequences: 1807
Number of extensions: 5425
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)